I've read that all anemones are opportunity eaters, so if yours was hungry and able to reach the fish and sting it enough, it could have very well eaten it. Some suggest the longer the tentacles, the higher the possibility the anemone will catch and eat a fish or crab etc.
Make sure you check your overflow (I`ve found my goby in there multiple times) and any hiding spots. If you don`t see your fish for a while, I would assume it`s toast.
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