That's interesting that u mentioned that as I had a similar experience, to answer your question though, I believe it is safe the cut the bottom, just make sure you don't have baby heads growing. My frogspawn went from two heads to 5 big and 4 baby ones!
Don't let the fleshy part touch the other corals, two heads from my candy cane had died as a result of that.
Cheers,
Steve
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