Im not sure but have you tried doing the factory reset on it....I know you have to do that to change the program....maybe you have to to get it to recognize the other units?
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260g mixed reef, 105g sump, water blaster 7000 return, Bubble King SM 300 skimmer, Aqua Controller Jr, 4 radions, 3 Tunze 6055s,1 tunze 6065, 2 Vortech MP40s, Vortech MP20, Tunze ATO, GHL SA2 doser, 2 TLF reactors (1 carbon, 1 rowa).
http://www.canreef.com/vbulletin/showthread.php?t=50034 . Tank Video here
http://www.vimeo.com/2304609 and here
http://www.vimeo.com/16591694