Best bets, in my opinion, for pygmy angels would be a flame angel or a potter's angel. There may be a few others but these ones are spectacular fish in my opinion and should do OK in your 46. They'll for sure leave your SPS alone, where things might get dicey with pygmy angels is with LPS and clam mantles, but these two species in particular should be OK even with those.
One caution though: one or the other, not both. Like many fish, they don't take too kindly to other fish with the same shape in their territory, as they view them as competition.
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-- Tony
My next hobby will be flooding my basement while repeatedly banging my head against a brick wall and tearing up $100 bills. Whee!
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